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BioPerl

Officially organized in 1995 and existing informally for several years prior, The Bioperl Project is an international association of developers of open source Perl tools for bioinformatics, genomics and life science research. BioPerl home is here.

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Bio::Coordinate::Collection could DoWhatIMean better (w/ patch) by George Hartzell-2

by Aaron Mackey

What's up with line 248 of Bio::Coordinate::Pair? by George Hartzell-2

by George Hartzell-2

parsing result of CAP3 (ACE file) by Laurent Manchon

by Joshua Udall-2

Fitch's Parsimony Algorithm with Perl by Gundala Viswanath

by Gundala Viswanath

Re: Bioperl-l Digest, Vol 57, Issue 10 by Susan J. Miller

by Raul Mendez Giraldez

interpro parsing enhancement? by John Osborne-7

by John Osborne-7

Re: Bio::Tools::dpAlign feature request by Jason Stajich-3

by Chris Fields-5

DB_File and assembly IO by Joshua Udall-2

by Chris Fields-5

Pdoc updates by Mauricio Herrera Cua...

by Mauricio Herrera Cua...

adding HSP information to BLAST output graphic (Bio::Graphics) by Adam Witney

by Adam Witney

Re: Bioperl Primer3 Tm calculation of a pre-defined primer by Giles Weaver

by Giles Weaver

Bio::Align::DNAStatistics.pm by Dominic Rose

by Heikki Lehvaslaiho

Bio::Align::DNAStatistics.pm by Dominic Rose

by Dominic Rose

Count or weight matrix in bioperl? by Milan-3

by Milan-3

bioperl-network test error by Mohammad Shafiullah

by Brian Osborne-2

Annotations issue (GenBank) by Chris Fields-5

by Chris Fields-5

Bio::Annotation issues with BioSQL by Mark Johnson-21

by Chris Fields-5

RemoteBlast's save_output not saving properly for blasttable by Ulas Karaoz

by Chris Fields-5

EUtilities help by Warren Gallin

by Chris Fields-5

Bioperl Primer3 Tm calculation of a pre-defined primer by XQ Xu

by XQ Xu

Build.PL options? by Michael Thon-6

by Sendu Bala-2

need help in parsing KEGG data by neeti somaiya

by neeti somaiya

TreeFunctionsI::findnode_by_id ? by Heikki Lehvaslaiho

by Heikki Lehvaslaiho

Re: [Wg-phyloinformatics] Re: phyloXML weekly report by Han, Mira

by Hilmar Lapp-3

lazy symbol binding by Carl Schmidt-2

by rvos

help creating de novo GFF3 by Joshua Orvis

by Joshua Orvis

Code to contribute by Michael Janis

by Chris Fields-5

Re: [Obo-discuss] software developer resources, OBO API? by Hilmar Lapp

by Erick Antezana

Re: HOWTO:Graphics/BLAST output by N-16

by N-16

Can't locate IO/String.pm._._..install problem by mrphysh@juno.com

by Jay Hannah

Finding possible primers regex by Benbo

by Hilmar Lapp

get_lca method very slow on many nodes by Gabriel Valiente

by Sendu Bala-2

protein pattern scan by Laurent Manchon

by Chris Fields-5

malloc errors while using Bio::SeqIO? by rvos

by George Hartzell-2

(TreeFunctionsI) merge_lineage method very slow on large trees by Tristan Lefebure-2

by Tristan Lefebure-2

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